Bioconductor - BiocPkgTools
Bioconductor 3.22
Software Packages
BiocPkgTools
BiocPkgTools
This is the
released
version of BiocPkgTools; for the devel version, see
BiocPkgTools
Collection of simple tools for learning about Bioconductor Packages
DOI:
10.18129/B9.bioc.BiocPkgTools
Bioconductor version:
Release (3.22)
Bioconductor has a rich ecosystem of metadata around packages, usage, and build status. This package is a simple collection of functions to access that metadata from R. The goal is to expose metadata for data mining and value-added functionality such as package searching, text mining, and analytics on packages.
Author:
Shian Su [aut, ctb], Lori Shepherd [ctb], Marcel Ramos [aut, ctb]
ORCID: 0000-0002-3242-0582
, Felix G.M. Ernst [ctb], Jennifer Wokaty [ctb], Charlotte Soneson [ctb], Martin Morgan [ctb], Vince Carey [ctb], Sean Davis [aut, cre]
Maintainer:
Sean Davis
Citation (from within R, enter
citation("BiocPkgTools")
):
Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("BiocPkgTools")
For older versions of R, please refer to the appropriate
Bioconductor release
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("BiocPkgTools")
Overview of BiocPkgTools
HTML
R Script
Reference Manual
PDF
NEWS
Text
LICENSE
Text
Need some help? Ask on the Bioconductor Support site!
Details
biocViews
Infrastructure
Software
Version
1.28.3
In Bioconductor since
BioC 3.8 (R-3.5) (7.5 years)
License
MIT + file
LICENSE
Depends
htmlwidgets
, R (>= 4.1.0)
Imports
BiocFileCache
BiocManager
biocViews
tibble
, methods,
rlang
stringr
, stats,
rvest
dplyr
xml2
readr
httr
httr2
htmltools
DT
, tools, utils,
igraph
(>= 2.0.0),
jsonlite
gh
RBGL
graph
curl
glue
lubridate
purrr
tidyr
yaml
System Requirements
mailsend-go
URL
Bug Reports
See More
Suggests
BiocStyle
knitr
rmarkdown
testthat
tm
networkD3
visNetwork
clipr
blastula
kableExtra
DiagrammeR
SummarizedExperiment
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
biocViews
, OSTA,
rworkflows
Links To Me
Build Report
Build Report
Package Archives
Follow
Installation
instructions to use this package in your R session.
Source Package
BiocPkgTools_1.28.3.tar.gz
Windows Binary (x86_64)
BiocPkgTools_1.28.3.zip
macOS Binary (x86_64)
BiocPkgTools_1.28.3.tgz
macOS Binary (arm64)
BiocPkgTools_1.28.3.tgz
Source Repository
git clone https://git.bioconductor.org/packages/BiocPkgTools
Source Repository (Developer Access)
git clone git@git.bioconductor.org:packages/BiocPkgTools
Bioc Package Browser
Package Short Url
Package Downloads Report
Download Stats
Old Source Packages for BioC 3.22
Source Archive