signatureSearchData

This is the released version of signatureSearchData; for the devel version, see signatureSearchData.

Datasets for signatureSearch package

Bioconductor version: Release (3.22)

CMAP/LINCS hdf5 databases and other annotations used for signatureSearch software package.

Author: Yuzhu Duan <yduan004 at ucr.edu>, Brendan Gongol <bgong001 at ucr.edu>, Thomas Girke <thomas.girke at ucr.edu>

Maintainer: Brendan Gongol <bgong001 at ucr.edu>

Citation (from within R, enter citation("signatureSearchData")):

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("signatureSearchData")

For older versions of R, please refer to the appropriate Bioconductor release.

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("signatureSearchData")

biocViews	ExperimentData, ExperimentHub, ExpressionData
Version	1.24.0
License	Artistic-2.0
Depends	R (>= 3.6)
Imports	ExperimentHub, utils, affy, limma, Biobase, magrittr, dplyr, R.utils, stats, rhdf5
System Requirements
URL

Follow Installation instructions to use this package in your R session.