Galaxy Community Help

Galaxy Community Help
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Release of Galaxy 26.0
News & Updates
news
release
Dear Galaxy Community,
The Galaxy Committers team is pleased to announce the Galaxy 26.0 release!
Release Notes

User release announcement

Developer and admin release announcement

GitHub Comprehensive Release No…
34
April 13, 2026
FAQ: Create a Qiime2 qza artifact from a Galaxy collection in ONE STEP!
Resources
gtn-tutorial
collections
resources
tool-help
qiime2
qiime2_core__tools__import
collection-shape
qiime2_core__tools__import_fastq
:partying_face: Try the new QZA creation method!
Creating a Qiime2 qza artifact :magic_wand: directly from a Galaxy Collection
1. Create your Galaxy Collection!
Single end will have the collection shape List
Paired end…
57
February 25, 2026
How to access your Self Serve extended data storage at UseGalaxy servers!
Resources
account
storage-dashboard
resources
scratch-space
I’m working on a transciptomics data which will probably exceed the given 250GB data. Is there any possible solution to this? for example increasing my storage?
2540
August 12, 2024
Navigating your data storage: existing data, new data, and different storage space options with screenshots!
Resources
troubleshooting
storage-dashboard
resources
The program has been permanently deleted, but it still occupies 250GB of memory.How should this problem be solved?
256
October 27, 2025
Why collections?
Resources
news
dataset
collections
resources
collection-shape
Collections are one of the super-killer features of Galaxy!
By Anton Nekrutenko
October 21, 2025
201
October 21, 2025
Getting Data into Galaxy
Resources
upload
resources
Data Upload
Use the Upload tool to load datasets into your history
:arrow_up:

Files from your computer using Choose local files
Files with a public URL using Paste/Fetch data
Files from remote data sources using Choose…
1800
September 29, 2023
FAQ: NCBI reference data
Resources
reference-index
reference-annotation
reference-genome
resources
:speech_balloon: How to find NCBI Reference data?
Q: Where can I find the URL links to a reference genome FASTA, annotation, or GenBank file?
A: Use the NCBI Genome Assembly page for the organism of interest — for examp…
281
June 12, 2025
Stuck in queue SPAdes
usegalaxy.org support
spades
tool-help
April 24, 2026
MaxQuant probelm
usegalaxy.eu support
maxquant
April 24, 2026
Installing a new tool
usegalaxy.eu support
tool-request
34
April 23, 2026
Hyperparameter search missing option
usegalaxy.org support
gtn-tutorial
11
April 23, 2026
Action requires account activation
account
10
April 23, 2026
Jobs stuck overnight
usegalaxy.eu support
troubleshooting
queued-gray-datasets
38
April 23, 2026
Hosting to UCSC with Custom Builds
usegalaxy.org support
galaxy-local
troubleshooting
April 22, 2026
IQ-TREE configuration: consensus tree creation with 5 newick tree files
usegalaxy.eu support
tool-help
phylogeny
iqtree
10
38
April 22, 2026
Bacteria community and Antibiotic Resistance Gene
workflow
10
April 22, 2026
Request Adding Salmonella cgMLST (3002 loci) scheme for CoreProfiler allele_calling
usegalaxy.org support
reference-index
coreprofiler_allele_calling
26
April 22, 2026
Issue at RNA-STAR step: adjusting GTF annotation
usegalaxy.org support
mapping
transcriptomics
rna_star
17
April 22, 2026
Jobs Stuck processing with a workflow: Using the job cache to rerun workflows with canceled outputs
usegalaxy.eu support
workflow
troubleshooting
queued-gray-datasets
workflow-options
resources
32
April 21, 2026
RNA-STAR has been queued
queued-gray-datasets
431
April 21, 2026
Issue with file upload and missing history data on Galaxy
storage-dashboard
21
April 20, 2026
Problem with falco tool
usegalaxy.eu support
troubleshooting
usinggalaxy
23
April 20, 2026
Error while running metaspades
usegalaxy.org support
assembly
tool-help
metaspades
303
April 18, 2026
Fatal error: using trinity
assembly
transcriptomics
tool-deprecated
rna-seq
922
April 21, 2026
Error with de novo assembly using Trintiy
usegalaxy.org support
assembly
transcriptomics
tool-deprecated
rna-seq
415
April 18, 2026
How to use MEGAHIT
assembly
metagenomics
tool-help
megahit
146
April 18, 2026
Basic Comparative Transcriptomic Analysis Workflow
gtn-tutorial
iwc-workflows
405
April 18, 2026
Help with extracting genome sequences from MAF data
usegalaxy.org support
maf-manipulations
1327
April 18, 2026
Extract pairwise maf blocks tools asks for maf source but says 'no options available'
usegalaxy.org support
maf-manipulations
320
April 18, 2026
XMFA to MAF or Fasta
maf-manipulations
366
April 18, 2026
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